Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gm12085-201ENSMUST00000119263 940 ntBASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Gm18666-201ENSMUST00000190039 958 ntBASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smco3Q8BQM7 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smco3Q8BQM7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Gm7638-201ENSMUST00000121348 967 ntBASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.03□□□□□ -0.32
Smco3Q8BQM7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smco3Q8BQM7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smco3Q8BQM7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smco3Q8BQM7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smco3Q8BQM7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smco3Q8BQM7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smco3Q8BQM7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Smco3Q8BQM7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smco3Q8BQM7 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.02□□□□□ -0.33
Smco3Q8BQM7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms