Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scn3bQ8BHK2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Scn3bQ8BHK2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn3bQ8BHK2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn3bQ8BHK2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn3bQ8BHK2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Scn3bQ8BHK2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Scn3bQ8BHK2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 BC037039-201ENSMUST00000192003 2205 ntBASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Gm8495-201ENSMUST00000188740 694 ntBASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Gm37179-201ENSMUST00000194862 823 ntBASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Gm44450-201ENSMUST00000199528 114 ntBASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Gm20049-201ENSMUST00000219950 730 ntBASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Scn3bQ8BHK2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn3bQ8BHK2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms