Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Samm50Q8BGH2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
Samm50Q8BGH2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Samm50Q8BGH2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Mir3081-201ENSMUST00000175305 84 ntBASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Asic1-205ENSMUST00000228185 1818 ntBASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Samm50Q8BGH2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.5■□□□□ 0.55
Samm50Q8BGH2 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms