Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Thap2-203ENSMUST00000218989 527 ntBASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Gm18246-201ENSMUST00000221023 728 ntBASIC16.56■□□□□ 0.24
Npas4Q8BGD7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Npas4Q8BGD7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Grk6-207ENSMUST00000225925 2769 ntBASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Gm13616-201ENSMUST00000120600 222 ntBASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.55■□□□□ 0.24
Npas4Q8BGD7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Gm5312-201ENSMUST00000203728 547 ntBASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Npas4Q8BGD7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.53■□□□□ 0.24
Npas4Q8BGD7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Gm13365-201ENSMUST00000121188 973 ntBASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.53■□□□□ 0.24
Npas4Q8BGD7 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Gm44335-201ENSMUST00000196879 141 ntBASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Gm44297-201ENSMUST00000198304 141 ntBASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Gm44346-201ENSMUST00000198851 141 ntBASIC16.53■□□□□ 0.24
Npas4Q8BGD7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Npas4Q8BGD7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Npas4Q8BGD7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Npas4Q8BGD7 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Npas4Q8BGD7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Npas4Q8BGD7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms