Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh19Q80TF3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Gm15590-201ENSMUST00000078419 552 ntBASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Pcdh19Q80TF3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.06
Pcdh19Q80TF3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh19Q80TF3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh19Q80TF3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh19Q80TF3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh19Q80TF3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdh19Q80TF3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdh19Q80TF3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh19Q80TF3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh19Q80TF3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms