Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3d21Q7TSG5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Gm27357-201ENSMUST00000183754 135 ntBASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Gm44454-201ENSMUST00000198541 138 ntBASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3d21Q7TSG5 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sh3d21Q7TSG5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sh3d21Q7TSG5 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3d21Q7TSG5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3d21Q7TSG5 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.27■□□□□ 0.35
Sh3d21Q7TSG5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3d21Q7TSG5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3d21Q7TSG5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3d21Q7TSG5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3d21Q7TSG5 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3d21Q7TSG5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms