Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Casc4Q6P2L7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Casc4Q6P2L7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Casc4Q6P2L7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Casc4Q6P2L7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Casc4Q6P2L7 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.96■□□□□ 0.14
Casc4Q6P2L7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Gm12644-201ENSMUST00000119935 606 ntBASIC15.95■□□□□ 0.14
Casc4Q6P2L7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Gm25745-201ENSMUST00000174945 133 ntBASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Mir6404-201ENSMUST00000183699 94 ntBASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Gm17971-201ENSMUST00000190239 806 ntBASIC15.95■□□□□ 0.14
Casc4Q6P2L7 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Casc4Q6P2L7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms