Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sox17Q61473 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sox17Q61473 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox17Q61473 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.84□□□□□ -0.03
Sox17Q61473 Gm3375-201ENSMUST00000203929 796 ntBASIC14.84□□□□□ -0.03
Sox17Q61473 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox17Q61473 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox17Q61473 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox17Q61473 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sox17Q61473 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sox17Q61473 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox17Q61473 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox17Q61473 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sox17Q61473 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sox17Q61473 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox17Q61473 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.83□□□□□ -0.03
Sox17Q61473 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox17Q61473 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox17Q61473 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.83□□□□□ -0.03
Sox17Q61473 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox17Q61473 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox17Q61473 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox17Q61473 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox17Q61473 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.83□□□□□ -0.04
Sox17Q61473 Gm7370-201ENSMUST00000219471 767 ntBASIC14.83□□□□□ -0.04
Sox17Q61473 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.83□□□□□ -0.04
Sox17Q61473 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox17Q61473 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sox17Q61473 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.83□□□□□ -0.04
Sox17Q61473 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sox17Q61473 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox17Q61473 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox17Q61473 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox17Q61473 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.82□□□□□ -0.04
Sox17Q61473 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.82□□□□□ -0.04
Sox17Q61473 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Gm10566-201ENSMUST00000086739 996 ntBASIC14.82□□□□□ -0.04
Sox17Q61473 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Sox17Q61473 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sox17Q61473 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox17Q61473 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox17Q61473 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms