Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Zic4Q61467 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Timm23-208ENSMUST00000226683 750 ntBASIC12.81□□□□□ -0.36
Zic4Q61467 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.81□□□□□ -0.36
Zic4Q61467 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Zic4Q61467 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Zic4Q61467 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.81□□□□□ -0.36
Zic4Q61467 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.81□□□□□ -0.36
Zic4Q61467 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Zic4Q61467 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Zic4Q61467 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.8□□□□□ -0.36
Zic4Q61467 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.8□□□□□ -0.36
Zic4Q61467 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Zic4Q61467 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.8□□□□□ -0.36
Zic4Q61467 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.8□□□□□ -0.36
Zic4Q61467 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Zic4Q61467 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.79□□□□□ -0.36
Zic4Q61467 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Zic4Q61467 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Zic4Q61467 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Zic4Q61467 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.79□□□□□ -0.36
Zic4Q61467 Gm12527-201ENSMUST00000117967 564 ntBASIC12.79□□□□□ -0.36
Zic4Q61467 Gm11336-201ENSMUST00000118168 334 ntBASIC12.79□□□□□ -0.36
Zic4Q61467 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.79□□□□□ -0.36
Zic4Q61467 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.79□□□□□ -0.36
Zic4Q61467 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Zic4Q61467 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Zic4Q61467 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Zic4Q61467 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Zic4Q61467 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.78□□□□□ -0.36
Zic4Q61467 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.78□□□□□ -0.36
Zic4Q61467 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Zic4Q61467 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.78□□□□□ -0.36
Zic4Q61467 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.78□□□□□ -0.36
Zic4Q61467 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.78□□□□□ -0.36
Zic4Q61467 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Zic4Q61467 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.78□□□□□ -0.36
Zic4Q61467 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Zic4Q61467 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms