Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Six4Q61321 Grk6-207ENSMUST00000225925 2769 ntBASIC15.92■□□□□ 0.14
Six4Q61321 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.92■□□□□ 0.14
Six4Q61321 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Six4Q61321 Gm6296-201ENSMUST00000222599 943 ntBASIC15.92■□□□□ 0.14
Six4Q61321 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Six4Q61321 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Six4Q61321 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Six4Q61321 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.92■□□□□ 0.14
Six4Q61321 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Six4Q61321 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Six4Q61321 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Six4Q61321 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.91■□□□□ 0.14
Six4Q61321 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.91■□□□□ 0.14
Six4Q61321 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.91■□□□□ 0.14
Six4Q61321 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.91■□□□□ 0.14
Six4Q61321 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.91■□□□□ 0.14
Six4Q61321 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Six4Q61321 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Six4Q61321 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.9■□□□□ 0.14
Six4Q61321 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.9■□□□□ 0.14
Six4Q61321 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.9■□□□□ 0.14
Six4Q61321 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.9■□□□□ 0.14
Six4Q61321 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.9■□□□□ 0.14
Six4Q61321 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.9■□□□□ 0.14
Six4Q61321 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.9■□□□□ 0.14
Six4Q61321 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Six4Q61321 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Six4Q61321 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Six4Q61321 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Six4Q61321 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Gm13418-201ENSMUST00000119097 944 ntBASIC15.89■□□□□ 0.13
Six4Q61321 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.89■□□□□ 0.13
Six4Q61321 Gm11780-201ENSMUST00000136880 516 ntBASIC15.89■□□□□ 0.13
Six4Q61321 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.89■□□□□ 0.13
Six4Q61321 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Six4Q61321 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Six4Q61321 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Six4Q61321 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.88■□□□□ 0.13
Six4Q61321 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Six4Q61321 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.88■□□□□ 0.13
Six4Q61321 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Six4Q61321 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.88■□□□□ 0.13
Six4Q61321 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Six4Q61321 Gm11452-201ENSMUST00000122376 690 ntBASIC15.88■□□□□ 0.13
Six4Q61321 Gm4535-201ENSMUST00000182274 558 ntBASIC15.88■□□□□ 0.13
Six4Q61321 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.88■□□□□ 0.13
Six4Q61321 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.88■□□□□ 0.13
Six4Q61321 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Gm10355-201ENSMUST00000097146 517 ntBASIC15.88■□□□□ 0.13
Six4Q61321 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Six4Q61321 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms