Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Clns1aQ61189 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clns1aQ61189 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.54□□□□□ -0.24
Clns1aQ61189 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clns1aQ61189 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.54□□□□□ -0.24
Clns1aQ61189 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.54□□□□□ -0.24
Clns1aQ61189 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Clns1aQ61189 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Clns1aQ61189 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Clns1aQ61189 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Clns1aQ61189 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.54□□□□□ -0.24
Clns1aQ61189 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clns1aQ61189 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.53□□□□□ -0.24
Clns1aQ61189 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Clns1aQ61189 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.53□□□□□ -0.24
Clns1aQ61189 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Clns1aQ61189 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Clns1aQ61189 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Clns1aQ61189 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clns1aQ61189 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clns1aQ61189 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clns1aQ61189 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clns1aQ61189 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Clns1aQ61189 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.52□□□□□ -0.24
Clns1aQ61189 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Clns1aQ61189 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Gm13186-201ENSMUST00000118031 316 ntBASIC13.52□□□□□ -0.25
Clns1aQ61189 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.52□□□□□ -0.25
Clns1aQ61189 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.52□□□□□ -0.25
Clns1aQ61189 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.52□□□□□ -0.25
Clns1aQ61189 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Clns1aQ61189 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.52□□□□□ -0.25
Clns1aQ61189 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Clns1aQ61189 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.52□□□□□ -0.25
Clns1aQ61189 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clns1aQ61189 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
Clns1aQ61189 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Clns1aQ61189 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clns1aQ61189 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms