Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.11■□□□□ 0.49
Scnn1aQ61180 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.11■□□□□ 0.49
Scnn1aQ61180 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Scnn1aQ61180 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Gm2756-201ENSMUST00000195851 400 ntBASIC18.1■□□□□ 0.49
Scnn1aQ61180 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scnn1aQ61180 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.1■□□□□ 0.49
Scnn1aQ61180 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scnn1aQ61180 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Gm25911-201ENSMUST00000157621 56 ntBASIC18.09■□□□□ 0.49
Scnn1aQ61180 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.09■□□□□ 0.49
Scnn1aQ61180 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scnn1aQ61180 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scnn1aQ61180 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scnn1aQ61180 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.08■□□□□ 0.48
Scnn1aQ61180 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Scnn1aQ61180 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.08■□□□□ 0.48
Scnn1aQ61180 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.08■□□□□ 0.48
Scnn1aQ61180 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Grk6-207ENSMUST00000225925 2769 ntBASIC18.08■□□□□ 0.48
Scnn1aQ61180 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.08■□□□□ 0.48
Scnn1aQ61180 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scnn1aQ61180 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scnn1aQ61180 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scnn1aQ61180 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms