Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Rprl2-201ENSMUST00000157150 290 ntBASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 AC155252.2-201ENSMUST00000226946 680 ntBASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scaf1Q5U4C3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scaf1Q5U4C3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Gm13365-201ENSMUST00000121188 973 ntBASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scaf1Q5U4C3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Scaf1Q5U4C3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Scaf1Q5U4C3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Scaf1Q5U4C3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Gm16198-201ENSMUST00000118766 670 ntBASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Mir6990-201ENSMUST00000183724 91 ntBASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scaf1Q5U4C3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Scaf1Q5U4C3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms