Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-2Q5R1I4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-2Q5R1I4 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.83□□□□□ -0.19
Trav6-2Q5R1I4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Trav6-2Q5R1I4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-2Q5R1I4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-2Q5R1I4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Trav6-2Q5R1I4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-2Q5R1I4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Gm9682-201ENSMUST00000197505 556 ntBASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-2Q5R1I4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-2Q5R1I4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-2Q5R1I4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms