Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rnf43Q5NCP0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rnf43Q5NCP0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf43Q5NCP0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf43Q5NCP0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf43Q5NCP0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rnf43Q5NCP0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf43Q5NCP0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Rnf43Q5NCP0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rnf43Q5NCP0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rnf43Q5NCP0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Gm14701-201ENSMUST00000117156 348 ntBASIC16■□□□□ 0.15
Rnf43Q5NCP0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16■□□□□ 0.15
Rnf43Q5NCP0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Gm44872-201ENSMUST00000207864 420 ntBASIC16■□□□□ 0.15
Rnf43Q5NCP0 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16■□□□□ 0.15
Rnf43Q5NCP0 AC124549.3-201ENSMUST00000225541 367 ntBASIC16■□□□□ 0.15
Rnf43Q5NCP0 AC147366.1-201ENSMUST00000227671 852 ntBASIC16■□□□□ 0.15
Rnf43Q5NCP0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16■□□□□ 0.15
Rnf43Q5NCP0 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16■□□□□ 0.15
Rnf43Q5NCP0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rnf43Q5NCP0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
Rnf43Q5NCP0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms