Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Gm11594-201ENSMUST00000122313 162 ntBASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Prpf38aQ4FK66 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Prpf38aQ4FK66 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Gm11873-201ENSMUST00000117877 1304 ntBASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf38aQ4FK66 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Gm14494-201ENSMUST00000118786 435 ntBASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Gm4899-201ENSMUST00000178708 719 ntBASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf38aQ4FK66 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 AC158538.2-201ENSMUST00000225455 906 ntBASIC18.34■□□□□ 0.53
Prpf38aQ4FK66 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms