Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Tmem40Q4FJU9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Gm14494-201ENSMUST00000118786 435 ntBASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 AV026068-213ENSMUST00000223675 1171 ntBASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Tmem40Q4FJU9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Gm25116-201ENSMUST00000157191 122 ntBASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Gm27397-201ENSMUST00000184997 107 ntBASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Gm6550-201ENSMUST00000187574 993 ntBASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Gm6089-201ENSMUST00000197666 938 ntBASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tmem40Q4FJU9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Gm14140-201ENSMUST00000119999 995 ntBASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Gm24513-201ENSMUST00000174964 138 ntBASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Tmem40Q4FJU9 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms