Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trim63Q38HM4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim63Q38HM4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim63Q38HM4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim63Q38HM4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.08□□□□□ -0.31
Trim63Q38HM4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim63Q38HM4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim63Q38HM4 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.08□□□□□ -0.32
Trim63Q38HM4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.08□□□□□ -0.32
Trim63Q38HM4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.07□□□□□ -0.32
Trim63Q38HM4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.07□□□□□ -0.32
Trim63Q38HM4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim63Q38HM4 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim63Q38HM4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.06□□□□□ -0.32
Trim63Q38HM4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trim63Q38HM4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.06□□□□□ -0.32
Trim63Q38HM4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim63Q38HM4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim63Q38HM4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.05□□□□□ -0.32
Trim63Q38HM4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim63Q38HM4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms