Protein–RNA interactions for Protein: Q08EC4

Cass4, Cas scaffolding protein family member 4, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cass4Q08EC4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Gm28659-201ENSMUST00000188013 759 ntBASIC14.41□□□□□ -0.1
Cass4Q08EC4 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.41□□□□□ -0.1
Cass4Q08EC4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.41□□□□□ -0.1
Cass4Q08EC4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Prob1-201ENSMUST00000097619 3021 ntBASIC14.41□□□□□ -0.1
Cass4Q08EC4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cass4Q08EC4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Mir8098-201ENSMUST00000184011 137 ntBASIC14.4□□□□□ -0.1
Cass4Q08EC4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.4□□□□□ -0.1
Cass4Q08EC4 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.4□□□□□ -0.1
Cass4Q08EC4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cass4Q08EC4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Cass4Q08EC4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Mir6404-201ENSMUST00000183699 94 ntBASIC14.39□□□□□ -0.11
Cass4Q08EC4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.39□□□□□ -0.11
Cass4Q08EC4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cass4Q08EC4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cass4Q08EC4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cass4Q08EC4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cass4Q08EC4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.38□□□□□ -0.11
Cass4Q08EC4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.38□□□□□ -0.11
Cass4Q08EC4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cass4Q08EC4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cass4Q08EC4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cass4Q08EC4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cass4Q08EC4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms