Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smarcc1P97496 Gm43125-201ENSMUST00000201724 730 ntBASIC19.68■□□□□ 0.74
Smarcc1P97496 Gm18246-201ENSMUST00000221023 728 ntBASIC19.68■□□□□ 0.74
Smarcc1P97496 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Smarcc1P97496 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.68■□□□□ 0.74
Smarcc1P97496 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smarcc1P97496 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smarcc1P97496 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
Smarcc1P97496 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.67■□□□□ 0.74
Smarcc1P97496 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.67■□□□□ 0.74
Smarcc1P97496 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.67■□□□□ 0.74
Smarcc1P97496 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.67■□□□□ 0.74
Smarcc1P97496 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.67■□□□□ 0.74
Smarcc1P97496 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarcc1P97496 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarcc1P97496 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smarcc1P97496 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarcc1P97496 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarcc1P97496 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.67■□□□□ 0.74
Smarcc1P97496 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.66■□□□□ 0.74
Smarcc1P97496 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Smarcc1P97496 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smarcc1P97496 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Smarcc1P97496 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Smarcc1P97496 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Smarcc1P97496 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.66■□□□□ 0.74
Smarcc1P97496 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Smarcc1P97496 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.66■□□□□ 0.74
Smarcc1P97496 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.66■□□□□ 0.74
Smarcc1P97496 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarcc1P97496 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smarcc1P97496 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Smarcc1P97496 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarcc1P97496 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.64■□□□□ 0.74
Smarcc1P97496 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smarcc1P97496 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smarcc1P97496 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smarcc1P97496 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Smarcc1P97496 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.64■□□□□ 0.73
Smarcc1P97496 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.64■□□□□ 0.73
Smarcc1P97496 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.64■□□□□ 0.73
Smarcc1P97496 Gm22175-201ENSMUST00000175007 78 ntBASIC19.64■□□□□ 0.73
Smarcc1P97496 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Smarcc1P97496 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarcc1P97496 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms