Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.53□□□□□ -0.08
Cacna1aP97445 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cacna1aP97445 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.52□□□□□ -0.08
Cacna1aP97445 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 Gm27301-201ENSMUST00000184012 127 ntBASIC14.52□□□□□ -0.08
Cacna1aP97445 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.52□□□□□ -0.08
Cacna1aP97445 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.52□□□□□ -0.08
Cacna1aP97445 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cacna1aP97445 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cacna1aP97445 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cacna1aP97445 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.52□□□□□ -0.09
Cacna1aP97445 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Cacna1aP97445 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.52□□□□□ -0.09
Cacna1aP97445 Mir1895-201ENSMUST00000122615 79 ntBASIC14.52□□□□□ -0.09
Cacna1aP97445 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Cacna1aP97445 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.52□□□□□ -0.09
Cacna1aP97445 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.52□□□□□ -0.09
Cacna1aP97445 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.52□□□□□ -0.09
Cacna1aP97445 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.52□□□□□ -0.09
Cacna1aP97445 Gm2423-201ENSMUST00000074863 733 ntBASIC14.52□□□□□ -0.09
Cacna1aP97445 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cacna1aP97445 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.51□□□□□ -0.09
Cacna1aP97445 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.51□□□□□ -0.09
Cacna1aP97445 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cacna1aP97445 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Cacna1aP97445 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.51□□□□□ -0.09
Cacna1aP97445 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.51□□□□□ -0.09
Cacna1aP97445 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.51□□□□□ -0.09
Cacna1aP97445 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.51□□□□□ -0.09
Cacna1aP97445 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cacna1aP97445 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1aP97445 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.5□□□□□ -0.09
Cacna1aP97445 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.5□□□□□ -0.09
Cacna1aP97445 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.5□□□□□ -0.09
Cacna1aP97445 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Cacna1aP97445 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cacna1aP97445 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms