Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.62□□□□□ -0.23
Nkx3-1P97436 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nkx3-1P97436 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.61□□□□□ -0.23
Nkx3-1P97436 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Mir8117-201ENSMUST00000184773 107 ntBASIC13.61□□□□□ -0.23
Nkx3-1P97436 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.61□□□□□ -0.23
Nkx3-1P97436 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Gm10175-201ENSMUST00000086013 645 ntBASIC13.61□□□□□ -0.23
Nkx3-1P97436 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.61□□□□□ -0.23
Nkx3-1P97436 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.61□□□□□ -0.23
Nkx3-1P97436 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Gm8344-201ENSMUST00000119813 856 ntBASIC13.6□□□□□ -0.23
Nkx3-1P97436 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Gm25911-201ENSMUST00000157621 56 ntBASIC13.6□□□□□ -0.23
Nkx3-1P97436 Gm45167-201ENSMUST00000208007 322 ntBASIC13.6□□□□□ -0.23
Nkx3-1P97436 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.6□□□□□ -0.23
Nkx3-1P97436 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nkx3-1P97436 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.59□□□□□ -0.23
Nkx3-1P97436 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Gm37153-201ENSMUST00000193637 231 ntBASIC13.59□□□□□ -0.23
Nkx3-1P97436 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx3-1P97436 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.59□□□□□ -0.23
Nkx3-1P97436 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nkx3-1P97436 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms