Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.07■□□□□ 0.32
CiitaP79621 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.07■□□□□ 0.32
CiitaP79621 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CiitaP79621 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.07■□□□□ 0.32
CiitaP79621 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CiitaP79621 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.07■□□□□ 0.32
CiitaP79621 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CiitaP79621 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CiitaP79621 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.06■□□□□ 0.32
CiitaP79621 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CiitaP79621 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.06■□□□□ 0.32
CiitaP79621 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.06■□□□□ 0.32
CiitaP79621 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.06■□□□□ 0.32
CiitaP79621 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.06■□□□□ 0.32
CiitaP79621 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.06■□□□□ 0.32
CiitaP79621 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.06■□□□□ 0.32
CiitaP79621 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.06■□□□□ 0.32
CiitaP79621 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.06■□□□□ 0.32
CiitaP79621 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.06■□□□□ 0.32
CiitaP79621 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CiitaP79621 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CiitaP79621 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CiitaP79621 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CiitaP79621 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CiitaP79621 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CiitaP79621 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
CiitaP79621 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.05■□□□□ 0.32
CiitaP79621 Gm37153-201ENSMUST00000193637 231 ntBASIC17.05■□□□□ 0.32
CiitaP79621 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.05■□□□□ 0.32
CiitaP79621 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.05■□□□□ 0.32
CiitaP79621 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CiitaP79621 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.04■□□□□ 0.32
CiitaP79621 Gm14140-201ENSMUST00000119999 995 ntBASIC17.04■□□□□ 0.32
CiitaP79621 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.04■□□□□ 0.32
CiitaP79621 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.04■□□□□ 0.32
CiitaP79621 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CiitaP79621 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CiitaP79621 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.04■□□□□ 0.32
CiitaP79621 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CiitaP79621 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms