Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim4P70271 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim4P70271 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.14□□□□□ -0.31
Pdlim4P70271 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pdlim4P70271 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pdlim4P70271 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.14□□□□□ -0.31
Pdlim4P70271 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pdlim4P70271 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pdlim4P70271 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Gm44454-201ENSMUST00000198541 138 ntBASIC13.13□□□□□ -0.31
Pdlim4P70271 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.13□□□□□ -0.31
Pdlim4P70271 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pdlim4P70271 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pdlim4P70271 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pdlim4P70271 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pdlim4P70271 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pdlim4P70271 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.12□□□□□ -0.31
Pdlim4P70271 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.12□□□□□ -0.31
Pdlim4P70271 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pdlim4P70271 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pdlim4P70271 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Pdlim4P70271 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Pdlim4P70271 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.11□□□□□ -0.31
Pdlim4P70271 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.11□□□□□ -0.31
Pdlim4P70271 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.11□□□□□ -0.31
Pdlim4P70271 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.11□□□□□ -0.31
Pdlim4P70271 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.11□□□□□ -0.31
Pdlim4P70271 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pdlim4P70271 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms