Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nphp4P59240 AC130669.1-201ENSMUST00000228537 1672 ntBASIC21.26■□□□□ 0.99
Nphp4P59240 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nphp4P59240 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
Nphp4P59240 AC025913.2-201ENSMUST00000220136 1766 ntBASIC21.26■□□□□ 0.99
Nphp4P59240 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nphp4P59240 Gm6226-201ENSMUST00000117765 1146 ntBASIC21.26■□□□□ 0.99
Nphp4P59240 Mir1895-201ENSMUST00000122615 79 ntBASIC21.26■□□□□ 0.99
Nphp4P59240 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nphp4P59240 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nphp4P59240 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nphp4P59240 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC21.25■□□□□ 0.99
Nphp4P59240 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC21.25■□□□□ 0.99
Nphp4P59240 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC21.25■□□□□ 0.99
Nphp4P59240 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC21.25■□□□□ 0.99
Nphp4P59240 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Gm8396-201ENSMUST00000057361 823 ntBASIC21.25■□□□□ 0.99
Nphp4P59240 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nphp4P59240 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nphp4P59240 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nphp4P59240 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Nphp4P59240 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC21.24■□□□□ 0.99
Nphp4P59240 Gm11745-201ENSMUST00000121669 448 ntBASIC21.24■□□□□ 0.99
Nphp4P59240 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC21.24■□□□□ 0.99
Nphp4P59240 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 Gm13332-201ENSMUST00000120451 1398 ntBASIC21.24■□□□□ 0.99
Nphp4P59240 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC21.24■□□□□ 0.99
Nphp4P59240 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Nphp4P59240 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nphp4P59240 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 Gm45293-201ENSMUST00000209754 1812 ntBASIC21.23■□□□□ 0.99
Nphp4P59240 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Nphp4P59240 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC21.23■□□□□ 0.99
Nphp4P59240 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC21.23■□□□□ 0.99
Nphp4P59240 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Nphp4P59240 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nphp4P59240 AC153526.5-201ENSMUST00000218661 2147 ntBASIC21.23■□□□□ 0.99
Nphp4P59240 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Nphp4P59240 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nphp4P59240 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Nphp4P59240 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nphp4P59240 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nphp4P59240 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nphp4P59240 Nrn1-204ENSMUST00000224323 1779 ntBASIC21.22■□□□□ 0.99
Nphp4P59240 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nphp4P59240 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC21.21■□□□□ 0.99
Nphp4P59240 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nphp4P59240 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.21■□□□□ 0.99
Nphp4P59240 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Nphp4P59240 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nphp4P59240 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nphp4P59240 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nphp4P59240 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nphp4P59240 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nphp4P59240 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Nphp4P59240 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nphp4P59240 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nphp4P59240 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Nphp4P59240 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Nphp4P59240 Gm9385-201ENSMUST00000117563 472 ntBASIC21.21■□□□□ 0.99
Nphp4P59240 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC21.21■□□□□ 0.99
Nphp4P59240 Gm11025-201ENSMUST00000140773 466 ntBASIC21.21■□□□□ 0.99
Nphp4P59240 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC21.21■□□□□ 0.99
Nphp4P59240 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Nphp4P59240 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nphp4P59240 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC21.21■□□□□ 0.99
Nphp4P59240 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.99
Nphp4P59240 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 7.5 ms