Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tpm1P58771 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tpm1P58771 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.63■□□□□ 0.41
Tpm1P58771 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.63■□□□□ 0.41
Tpm1P58771 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Tpm1P58771 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tpm1P58771 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tpm1P58771 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.63■□□□□ 0.41
Tpm1P58771 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tpm1P58771 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.62■□□□□ 0.41
Tpm1P58771 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.62■□□□□ 0.41
Tpm1P58771 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Gm13168-201ENSMUST00000121771 632 ntBASIC17.62■□□□□ 0.41
Tpm1P58771 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.62■□□□□ 0.41
Tpm1P58771 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.62■□□□□ 0.41
Tpm1P58771 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Tpm1P58771 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tpm1P58771 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.62■□□□□ 0.41
Tpm1P58771 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tpm1P58771 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Tpm1P58771 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Tpm1P58771 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Gm715-201ENSMUST00000117865 831 ntBASIC17.61■□□□□ 0.41
Tpm1P58771 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.61■□□□□ 0.41
Tpm1P58771 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tpm1P58771 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tpm1P58771 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tpm1P58771 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Tpm1P58771 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Tpm1P58771 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tpm1P58771 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.6■□□□□ 0.41
Tpm1P58771 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.6■□□□□ 0.41
Tpm1P58771 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.6■□□□□ 0.41
Tpm1P58771 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.6■□□□□ 0.41
Tpm1P58771 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.6■□□□□ 0.41
Tpm1P58771 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.6■□□□□ 0.41
Tpm1P58771 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tpm1P58771 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms