Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cldn18P56857 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldn18P56857 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldn18P56857 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.12□□□□□ -0.15
Cldn18P56857 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.12□□□□□ -0.15
Cldn18P56857 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cldn18P56857 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.12□□□□□ -0.15
Cldn18P56857 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.12□□□□□ -0.15
Cldn18P56857 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.12□□□□□ -0.15
Cldn18P56857 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.12□□□□□ -0.15
Cldn18P56857 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Cldn18P56857 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Cldn18P56857 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.12□□□□□ -0.15
Cldn18P56857 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldn18P56857 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldn18P56857 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cldn18P56857 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldn18P56857 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cldn18P56857 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.11□□□□□ -0.15
Cldn18P56857 Dancr-204ENSMUST00000132389 2347 ntBASIC14.11□□□□□ -0.15
Cldn18P56857 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.11□□□□□ -0.15
Cldn18P56857 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldn18P56857 Gm6296-201ENSMUST00000222599 943 ntBASIC14.11□□□□□ -0.15
Cldn18P56857 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cldn18P56857 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldn18P56857 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Cldn18P56857 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldn18P56857 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.1□□□□□ -0.15
Cldn18P56857 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cldn18P56857 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.1□□□□□ -0.15
Cldn18P56857 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Gm4535-201ENSMUST00000182274 558 ntBASIC14.1□□□□□ -0.15
Cldn18P56857 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.1□□□□□ -0.15
Cldn18P56857 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.1□□□□□ -0.15
Cldn18P56857 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Gm10355-201ENSMUST00000097146 517 ntBASIC14.1□□□□□ -0.15
Cldn18P56857 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldn18P56857 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldn18P56857 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cldn18P56857 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.09□□□□□ -0.15
Cldn18P56857 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cldn18P56857 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cldn18P56857 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.09□□□□□ -0.15
Cldn18P56857 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cldn18P56857 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms