Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nkx2-1P50220 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.11□□□□□ -0.31
Nkx2-1P50220 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Gm36967-201ENSMUST00000193814 266 ntBASIC13.11□□□□□ -0.31
Nkx2-1P50220 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.11□□□□□ -0.31
Nkx2-1P50220 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.11□□□□□ -0.31
Nkx2-1P50220 Gm7791-201ENSMUST00000219066 539 ntBASIC13.11□□□□□ -0.31
Nkx2-1P50220 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.11□□□□□ -0.31
Nkx2-1P50220 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nkx2-1P50220 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.1□□□□□ -0.31
Nkx2-1P50220 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Gm715-201ENSMUST00000117865 831 ntBASIC13.1□□□□□ -0.31
Nkx2-1P50220 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Gm18115-201ENSMUST00000221209 621 ntBASIC13.1□□□□□ -0.31
Nkx2-1P50220 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Phf7-203ENSMUST00000226565 1971 ntBASIC13.1□□□□□ -0.31
Nkx2-1P50220 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nkx2-1P50220 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.09□□□□□ -0.31
Nkx2-1P50220 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.09□□□□□ -0.31
Nkx2-1P50220 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nkx2-1P50220 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms