Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.85□□□□□ -0.19
GdnfP48540 Gm13186-201ENSMUST00000118031 316 ntBASIC13.85□□□□□ -0.19
GdnfP48540 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.85□□□□□ -0.19
GdnfP48540 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.85□□□□□ -0.19
GdnfP48540 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.85□□□□□ -0.19
GdnfP48540 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GdnfP48540 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.84□□□□□ -0.19
GdnfP48540 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GdnfP48540 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
GdnfP48540 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.84□□□□□ -0.19
GdnfP48540 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.84□□□□□ -0.19
GdnfP48540 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
GdnfP48540 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.84□□□□□ -0.19
GdnfP48540 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.84□□□□□ -0.19
GdnfP48540 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
GdnfP48540 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
GdnfP48540 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.83□□□□□ -0.19
GdnfP48540 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
GdnfP48540 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.83□□□□□ -0.2
GdnfP48540 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
GdnfP48540 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
GdnfP48540 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.83□□□□□ -0.2
GdnfP48540 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
GdnfP48540 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.83□□□□□ -0.2
GdnfP48540 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GdnfP48540 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.82□□□□□ -0.2
GdnfP48540 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.82□□□□□ -0.2
GdnfP48540 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
GdnfP48540 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.82□□□□□ -0.2
GdnfP48540 Mir1668-201ENSMUST00000184114 107 ntBASIC13.82□□□□□ -0.2
GdnfP48540 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.82□□□□□ -0.2
GdnfP48540 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.82□□□□□ -0.2
GdnfP48540 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms