Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmx3P42581 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmx3P42581 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmx3P42581 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hmx3P42581 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmx3P42581 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmx3P42581 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmx3P42581 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hmx3P42581 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.21□□□□□ -0.29
Hmx3P42581 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hmx3P42581 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hmx3P42581 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hmx3P42581 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.21□□□□□ -0.29
Hmx3P42581 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hmx3P42581 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.21□□□□□ -0.29
Hmx3P42581 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.21□□□□□ -0.29
Hmx3P42581 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.21□□□□□ -0.29
Hmx3P42581 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.21□□□□□ -0.29
Hmx3P42581 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.21□□□□□ -0.29
Hmx3P42581 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Hmx3P42581 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hmx3P42581 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hmx3P42581 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Hmx3P42581 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Hmx3P42581 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.21□□□□□ -0.3
Hmx3P42581 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hmx3P42581 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hmx3P42581 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Hmx3P42581 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.21□□□□□ -0.3
Hmx3P42581 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Hmx3P42581 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hmx3P42581 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.2□□□□□ -0.3
Hmx3P42581 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hmx3P42581 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.2□□□□□ -0.3
Hmx3P42581 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.2□□□□□ -0.3
Hmx3P42581 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.2□□□□□ -0.3
Hmx3P42581 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.2□□□□□ -0.3
Hmx3P42581 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.2□□□□□ -0.3
Hmx3P42581 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Hmx3P42581 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.2□□□□□ -0.3
Hmx3P42581 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hmx3P42581 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Hmx3P42581 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hmx3P42581 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hmx3P42581 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmx3P42581 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.19□□□□□ -0.3
Hmx3P42581 Gm7791-201ENSMUST00000219066 539 ntBASIC13.19□□□□□ -0.3
Hmx3P42581 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.19□□□□□ -0.3
Hmx3P42581 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hmx3P42581 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hmx3P42581 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms