Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Nkx1-2P42580 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Gm9013-201ENSMUST00000132939 882 ntBASIC19.44■□□□□ 0.7
Nkx1-2P42580 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.44■□□□□ 0.7
Nkx1-2P42580 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.44■□□□□ 0.7
Nkx1-2P42580 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx1-2P42580 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Gm6345-202ENSMUST00000180900 204 ntBASIC19.43■□□□□ 0.7
Nkx1-2P42580 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.43■□□□□ 0.7
Nkx1-2P42580 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.43■□□□□ 0.7
Nkx1-2P42580 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx1-2P42580 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx1-2P42580 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.41■□□□□ 0.7
Nkx1-2P42580 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Gm5587-201ENSMUST00000206270 674 ntBASIC19.41■□□□□ 0.7
Nkx1-2P42580 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx1-2P42580 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx1-2P42580 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx1-2P42580 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx1-2P42580 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx1-2P42580 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx1-2P42580 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.4■□□□□ 0.7
Nkx1-2P42580 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx1-2P42580 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx1-2P42580 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms