Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sox5P35710 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sox5P35710 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox5P35710 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sox5P35710 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.25■□□□□ 0.35
Sox5P35710 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Sox5P35710 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox5P35710 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sox5P35710 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox5P35710 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sox5P35710 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox5P35710 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sox5P35710 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox5P35710 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox5P35710 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sox5P35710 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sox5P35710 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.24■□□□□ 0.35
Sox5P35710 Gm6257-201ENSMUST00000163864 910 ntBASIC17.24■□□□□ 0.35
Sox5P35710 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.24■□□□□ 0.35
Sox5P35710 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sox5P35710 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Sox5P35710 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sox5P35710 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sox5P35710 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Sox5P35710 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Sox5P35710 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.23■□□□□ 0.35
Sox5P35710 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.23■□□□□ 0.35
Sox5P35710 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Sox5P35710 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sox5P35710 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.23■□□□□ 0.35
Sox5P35710 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox5P35710 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sox5P35710 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.22■□□□□ 0.35
Sox5P35710 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sox5P35710 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
Sox5P35710 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Gm15565-201ENSMUST00000118890 427 ntBASIC17.22■□□□□ 0.35
Sox5P35710 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.22■□□□□ 0.35
Sox5P35710 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox5P35710 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms