Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Gm4459-201ENSMUST00000118750 468 ntBASIC14.6□□□□□ -0.07
Foxa1P35582 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.6□□□□□ -0.07
Foxa1P35582 Gm34391-201ENSMUST00000203706 907 ntBASIC14.6□□□□□ -0.07
Foxa1P35582 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.6□□□□□ -0.07
Foxa1P35582 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Foxa1P35582 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Foxa1P35582 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Foxa1P35582 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.6□□□□□ -0.07
Foxa1P35582 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxa1P35582 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Foxa1P35582 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Foxa1P35582 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.59□□□□□ -0.07
Foxa1P35582 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.59□□□□□ -0.07
Foxa1P35582 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.59□□□□□ -0.07
Foxa1P35582 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Foxa1P35582 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Foxa1P35582 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Foxa1P35582 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Foxa1P35582 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Foxa1P35582 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Foxa1P35582 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Foxa1P35582 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.58□□□□□ -0.08
Foxa1P35582 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Foxa1P35582 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Gm24589-201ENSMUST00000116692 94 ntBASIC14.58□□□□□ -0.08
Foxa1P35582 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Gm12497-201ENSMUST00000138778 237 ntBASIC14.58□□□□□ -0.08
Foxa1P35582 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.58□□□□□ -0.08
Foxa1P35582 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.58□□□□□ -0.08
Foxa1P35582 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Foxa1P35582 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Foxa1P35582 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxa1P35582 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Foxa1P35582 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Foxa1P35582 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.57□□□□□ -0.08
Foxa1P35582 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.57□□□□□ -0.08
Foxa1P35582 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.57□□□□□ -0.08
Foxa1P35582 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.57□□□□□ -0.08
Foxa1P35582 Gm43347-201ENSMUST00000200226 580 ntBASIC14.57□□□□□ -0.08
Foxa1P35582 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Birc2-201ENSMUST00000054878 378 ntBASIC14.57□□□□□ -0.08
Foxa1P35582 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms