Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.54□□□□□ -0.08
Sftpa1P35242 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.54□□□□□ -0.08
Sftpa1P35242 Gm25948-201ENSMUST00000175334 112 ntBASIC14.54□□□□□ -0.08
Sftpa1P35242 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.54□□□□□ -0.08
Sftpa1P35242 Gm45612-201ENSMUST00000211320 160 ntBASIC14.54□□□□□ -0.08
Sftpa1P35242 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Sftpa1P35242 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sftpa1P35242 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Sftpa1P35242 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sftpa1P35242 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Sftpa1P35242 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sftpa1P35242 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sftpa1P35242 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sftpa1P35242 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sftpa1P35242 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sftpa1P35242 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sftpa1P35242 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sftpa1P35242 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.53□□□□□ -0.08
Sftpa1P35242 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sftpa1P35242 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.53□□□□□ -0.08
Sftpa1P35242 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Gm18489-201ENSMUST00000172565 551 ntBASIC14.53□□□□□ -0.08
Sftpa1P35242 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.53□□□□□ -0.08
Sftpa1P35242 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.53□□□□□ -0.08
Sftpa1P35242 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sftpa1P35242 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sftpa1P35242 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Sftpa1P35242 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sftpa1P35242 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sftpa1P35242 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sftpa1P35242 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sftpa1P35242 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sftpa1P35242 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sftpa1P35242 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.52□□□□□ -0.08
Sftpa1P35242 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.52□□□□□ -0.08
Sftpa1P35242 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.52□□□□□ -0.08
Sftpa1P35242 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.52□□□□□ -0.08
Sftpa1P35242 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Sftpa1P35242 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Gm43474-201ENSMUST00000196415 774 ntBASIC14.52□□□□□ -0.09
Sftpa1P35242 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.52□□□□□ -0.09
Sftpa1P35242 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.52□□□□□ -0.09
Sftpa1P35242 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Sftpa1P35242 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Sftpa1P35242 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sftpa1P35242 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.52□□□□□ -0.09
Sftpa1P35242 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sftpa1P35242 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sftpa1P35242 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sftpa1P35242 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Sftpa1P35242 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.51□□□□□ -0.09
Sftpa1P35242 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Sftpa1P35242 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.51□□□□□ -0.09
Sftpa1P35242 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sftpa1P35242 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms