Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BdnfP21237 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BdnfP21237 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.15■□□□□ 0.02
BdnfP21237 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BdnfP21237 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.15■□□□□ 0.02
BdnfP21237 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BdnfP21237 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BdnfP21237 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.15■□□□□ 0.02
BdnfP21237 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BdnfP21237 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.15■□□□□ 0.02
BdnfP21237 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BdnfP21237 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BdnfP21237 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
BdnfP21237 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
BdnfP21237 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.14■□□□□ 0.01
BdnfP21237 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
BdnfP21237 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Gm6433-201ENSMUST00000118634 875 ntBASIC15.14■□□□□ 0.01
BdnfP21237 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
BdnfP21237 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Gm22697-201ENSMUST00000175194 63 ntBASIC15.14■□□□□ 0.01
BdnfP21237 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.14■□□□□ 0.01
BdnfP21237 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.14■□□□□ 0.01
BdnfP21237 Gm21559-201ENSMUST00000220638 855 ntBASIC15.14■□□□□ 0.01
BdnfP21237 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Gm8587-201ENSMUST00000076538 843 ntBASIC15.14■□□□□ 0.01
BdnfP21237 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
BdnfP21237 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
BdnfP21237 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
BdnfP21237 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BdnfP21237 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BdnfP21237 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.13■□□□□ 0.01
BdnfP21237 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.13■□□□□ 0.01
BdnfP21237 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.13■□□□□ 0.01
BdnfP21237 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
BdnfP21237 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Sybu-209ENSMUST00000228639 4113 ntBASIC15.13■□□□□ 0.01
BdnfP21237 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
BdnfP21237 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
BdnfP21237 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
BdnfP21237 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BdnfP21237 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.12■□□□□ 0.01
BdnfP21237 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BdnfP21237 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Gm37722-201ENSMUST00000193757 208 ntBASIC15.12■□□□□ 0.01
BdnfP21237 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BdnfP21237 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.12■□□□□ 0.01
BdnfP21237 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BdnfP21237 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
BdnfP21237 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BdnfP21237 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
BdnfP21237 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms