Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PrnpP04925 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PrnpP04925 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PrnpP04925 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PrnpP04925 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PrnpP04925 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PrnpP04925 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PrnpP04925 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PrnpP04925 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PrnpP04925 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.3■□□□□ 0.2
PrnpP04925 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PrnpP04925 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PrnpP04925 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PrnpP04925 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Gm45612-201ENSMUST00000211320 160 ntBASIC16.3■□□□□ 0.2
PrnpP04925 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PrnpP04925 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrnpP04925 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PrnpP04925 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.29■□□□□ 0.2
PrnpP04925 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.29■□□□□ 0.2
PrnpP04925 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.29■□□□□ 0.2
PrnpP04925 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PrnpP04925 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.29■□□□□ 0.2
PrnpP04925 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PrnpP04925 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrnpP04925 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.28■□□□□ 0.2
PrnpP04925 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PrnpP04925 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.28■□□□□ 0.2
PrnpP04925 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.28■□□□□ 0.2
PrnpP04925 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PrnpP04925 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.28■□□□□ 0.2
PrnpP04925 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.28■□□□□ 0.2
PrnpP04925 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Gm18246-201ENSMUST00000221023 728 ntBASIC16.28■□□□□ 0.2
PrnpP04925 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PrnpP04925 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.28■□□□□ 0.2
PrnpP04925 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PrnpP04925 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.28■□□□□ 0.2
PrnpP04925 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrnpP04925 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PrnpP04925 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PrnpP04925 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PrnpP04925 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PrnpP04925 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PrnpP04925 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PrnpP04925 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PrnpP04925 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PrnpP04925 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PrnpP04925 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PrnpP04925 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.27■□□□□ 0.2
PrnpP04925 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.27■□□□□ 0.2
PrnpP04925 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.27■□□□□ 0.2
PrnpP04925 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PrnpP04925 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.27■□□□□ 0.2
PrnpP04925 Thap2-203ENSMUST00000218989 527 ntBASIC16.27■□□□□ 0.2
PrnpP04925 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.27■□□□□ 0.2
PrnpP04925 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PrnpP04925 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PrnpP04925 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PrnpP04925 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms