Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.17□□□□□ -0.62
Hbb-b1P02088 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.17□□□□□ -0.62
Hbb-b1P02088 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Flg-201ENSMUST00000050758 1488 ntBASIC11.17□□□□□ -0.62
Hbb-b1P02088 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hbb-b1P02088 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Hbb-b1P02088 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Hbb-b1P02088 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.16□□□□□ -0.62
Hbb-b1P02088 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Hbb-b1P02088 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Nespas-201ENSMUST00000143738 1083 ntBASIC11.16□□□□□ -0.62
Hbb-b1P02088 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Mir6349-201ENSMUST00000184059 97 ntBASIC11.16□□□□□ -0.62
Hbb-b1P02088 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Hbb-b1P02088 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Gm6420-201ENSMUST00000193885 723 ntBASIC11.15□□□□□ -0.62
Hbb-b1P02088 AC159205.3-201ENSMUST00000224614 874 ntBASIC11.15□□□□□ -0.62
Hbb-b1P02088 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Hbb-b1P02088 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms