Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn1O88704 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn1O88704 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn1O88704 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn1O88704 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn1O88704 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn1O88704 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn1O88704 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hcn1O88704 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.14■□□□□ 0.01
Hcn1O88704 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.14■□□□□ 0.01
Hcn1O88704 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Hcn1O88704 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.14■□□□□ 0.01
Hcn1O88704 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.14■□□□□ 0.01
Hcn1O88704 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hcn1O88704 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.14■□□□□ 0.01
Hcn1O88704 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hcn1O88704 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Hcn1O88704 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Gm17807-201ENSMUST00000186869 298 ntBASIC15.13■□□□□ 0.01
Hcn1O88704 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.13■□□□□ 0.01
Hcn1O88704 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.13■□□□□ 0.01
Hcn1O88704 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hcn1O88704 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.13■□□□□ 0.01
Hcn1O88704 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hcn1O88704 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.13■□□□□ 0.01
Hcn1O88704 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hcn1O88704 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Hcn1O88704 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hcn1O88704 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.12■□□□□ 0.01
Hcn1O88704 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Hcn1O88704 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Hcn1O88704 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Hcn1O88704 Olfr129-201ENSMUST00000122318 993 ntBASIC15.12■□□□□ 0.01
Hcn1O88704 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.12■□□□□ 0.01
Hcn1O88704 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Hcn1O88704 Gm27357-201ENSMUST00000183754 135 ntBASIC15.12■□□□□ 0.01
Hcn1O88704 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.12■□□□□ 0.01
Hcn1O88704 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Hcn1O88704 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Hcn1O88704 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.12■□□□□ 0.01
Hcn1O88704 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcn1O88704 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Hcn1O88704 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Gm9103-201ENSMUST00000119371 405 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms