Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Gm22619-201ENSMUST00000179516 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm25255-201ENSMUST00000179579 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm24755-201ENSMUST00000179691 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm26506-201ENSMUST00000179692 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm25086-201ENSMUST00000179931 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm23243-201ENSMUST00000180047 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm24659-201ENSMUST00000180212 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm24169-201ENSMUST00000180244 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm23689-201ENSMUST00000180354 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm27437-201ENSMUST00000183429 107 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm27359-201ENSMUST00000184153 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm27785-201ENSMUST00000184268 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm27466-201ENSMUST00000184396 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 Gm27703-201ENSMUST00000184836 110 ntBASIC17.17■□□□□ 0.34
Slc6a20bO88575 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slc6a20bO88575 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.16■□□□□ 0.34
Slc6a20bO88575 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a20bO88575 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.15■□□□□ 0.34
Slc6a20bO88575 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.15■□□□□ 0.34
Slc6a20bO88575 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Gm10253-201ENSMUST00000194270 940 ntBASIC17.15■□□□□ 0.34
Slc6a20bO88575 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a20bO88575 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc6a20bO88575 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.14■□□□□ 0.33
Slc6a20bO88575 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a20bO88575 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.13■□□□□ 0.33
Slc6a20bO88575 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Gm5866-201ENSMUST00000177881 973 ntBASIC17.13■□□□□ 0.33
Slc6a20bO88575 Gm18057-201ENSMUST00000208220 503 ntBASIC17.13■□□□□ 0.33
Slc6a20bO88575 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.13■□□□□ 0.33
Slc6a20bO88575 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.13■□□□□ 0.33
Slc6a20bO88575 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.13■□□□□ 0.33
Slc6a20bO88575 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a20bO88575 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms