Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.29■□□□□ 0.04
Cacna1hO88427 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.29■□□□□ 0.04
Cacna1hO88427 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.29■□□□□ 0.04
Cacna1hO88427 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.29■□□□□ 0.04
Cacna1hO88427 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.29■□□□□ 0.04
Cacna1hO88427 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Cacna1hO88427 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1hO88427 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1hO88427 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cacna1hO88427 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.28■□□□□ 0.04
Cacna1hO88427 Gm16198-201ENSMUST00000118766 670 ntBASIC15.28■□□□□ 0.04
Cacna1hO88427 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.28■□□□□ 0.04
Cacna1hO88427 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cacna1hO88427 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Cacna1hO88427 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1hO88427 AC131068.2-201ENSMUST00000226175 1453 ntBASIC15.28■□□□□ 0.04
Cacna1hO88427 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1hO88427 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1hO88427 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.28■□□□□ 0.04
Cacna1hO88427 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1hO88427 Gm9257-201ENSMUST00000221254 232 ntBASIC15.28■□□□□ 0.04
Cacna1hO88427 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Cacna1hO88427 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1hO88427 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1hO88427 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1hO88427 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1hO88427 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1hO88427 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1hO88427 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cacna1hO88427 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.27■□□□□ 0.04
Cacna1hO88427 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1hO88427 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1hO88427 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1hO88427 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cacna1hO88427 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.27■□□□□ 0.03
Cacna1hO88427 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.03
Cacna1hO88427 Gm29667-201ENSMUST00000190817 490 ntBASIC15.27■□□□□ 0.03
Cacna1hO88427 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.27■□□□□ 0.03
Cacna1hO88427 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.27■□□□□ 0.03
Cacna1hO88427 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.27■□□□□ 0.03
Cacna1hO88427 Gm10154-201ENSMUST00000084445 354 ntBASIC15.27■□□□□ 0.03
Cacna1hO88427 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cacna1hO88427 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Cacna1hO88427 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1hO88427 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.26■□□□□ 0.03
Cacna1hO88427 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.26■□□□□ 0.03
Cacna1hO88427 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1hO88427 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cacna1hO88427 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cacna1hO88427 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.25■□□□□ 0.03
Cacna1hO88427 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Gm18018-201ENSMUST00000198273 408 ntBASIC15.25■□□□□ 0.03
Cacna1hO88427 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.25■□□□□ 0.03
Cacna1hO88427 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.25■□□□□ 0.03
Cacna1hO88427 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms