Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.23□□□□□ -0.29
Gfi1bO70237 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.23□□□□□ -0.29
Gfi1bO70237 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.23□□□□□ -0.29
Gfi1bO70237 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.23□□□□□ -0.29
Gfi1bO70237 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Gfi1bO70237 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gfi1bO70237 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.23□□□□□ -0.29
Gfi1bO70237 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.23□□□□□ -0.29
Gfi1bO70237 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gfi1bO70237 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gfi1bO70237 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Gfi1bO70237 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Gfi1bO70237 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Gfi1bO70237 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.22□□□□□ -0.29
Gfi1bO70237 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Gfi1bO70237 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.22□□□□□ -0.29
Gfi1bO70237 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Gfi1bO70237 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Gfi1bO70237 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.22□□□□□ -0.29
Gfi1bO70237 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.22□□□□□ -0.29
Gfi1bO70237 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.22□□□□□ -0.29
Gfi1bO70237 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Gfi1bO70237 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Gfi1bO70237 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gfi1bO70237 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.21□□□□□ -0.29
Gfi1bO70237 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.21□□□□□ -0.29
Gfi1bO70237 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Gfi1bO70237 Gm30025-201ENSMUST00000218555 728 ntBASIC13.21□□□□□ -0.29
Gfi1bO70237 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.21□□□□□ -0.29
Gfi1bO70237 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.21□□□□□ -0.29
Gfi1bO70237 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Gfi1bO70237 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Gfi1bO70237 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gfi1bO70237 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Gfi1bO70237 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gfi1bO70237 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Gfi1bO70237 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Gfi1bO70237 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gfi1bO70237 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gfi1bO70237 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gfi1bO70237 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gfi1bO70237 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gfi1bO70237 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Gfi1bO70237 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms