Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pja1O55176 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pja1O55176 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Gm18032-201ENSMUST00000222541 538 ntBASIC16.67■□□□□ 0.26
Pja1O55176 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pja1O55176 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pja1O55176 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.67■□□□□ 0.26
Pja1O55176 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pja1O55176 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Gm15565-201ENSMUST00000118890 427 ntBASIC16.66■□□□□ 0.26
Pja1O55176 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pja1O55176 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.66■□□□□ 0.26
Pja1O55176 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Gm18101-201ENSMUST00000215769 548 ntBASIC16.66■□□□□ 0.26
Pja1O55176 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pja1O55176 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.65■□□□□ 0.26
Pja1O55176 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pja1O55176 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.65■□□□□ 0.26
Pja1O55176 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pja1O55176 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pja1O55176 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Pja1O55176 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pja1O55176 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pja1O55176 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pja1O55176 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.64■□□□□ 0.25
Pja1O55176 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Mir770-201ENSMUST00000103252 94 ntBASIC16.64■□□□□ 0.25
Pja1O55176 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.64■□□□□ 0.25
Pja1O55176 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.64■□□□□ 0.25
Pja1O55176 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pja1O55176 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.64■□□□□ 0.25
Pja1O55176 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.64■□□□□ 0.25
Pja1O55176 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pja1O55176 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.64■□□□□ 0.25
Pja1O55176 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pja1O55176 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.64■□□□□ 0.25
Pja1O55176 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pja1O55176 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms