Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl13O55038 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cxcl13O55038 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.32□□□□□ -0.28
Cxcl13O55038 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Cxcl13O55038 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl13O55038 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl13O55038 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.32□□□□□ -0.28
Cxcl13O55038 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl13O55038 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Cxcl13O55038 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.32□□□□□ -0.28
Cxcl13O55038 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cxcl13O55038 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl13O55038 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cxcl13O55038 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.31□□□□□ -0.28
Cxcl13O55038 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.31□□□□□ -0.28
Cxcl13O55038 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.31□□□□□ -0.28
Cxcl13O55038 Gm45167-201ENSMUST00000208007 322 ntBASIC13.31□□□□□ -0.28
Cxcl13O55038 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cxcl13O55038 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cxcl13O55038 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.31□□□□□ -0.28
Cxcl13O55038 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Cxcl13O55038 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.31□□□□□ -0.28
Cxcl13O55038 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cxcl13O55038 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.3□□□□□ -0.28
Cxcl13O55038 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl13O55038 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.3□□□□□ -0.28
Cxcl13O55038 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.3□□□□□ -0.28
Cxcl13O55038 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cxcl13O55038 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl13O55038 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cxcl13O55038 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cxcl13O55038 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl13O55038 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Gm14494-201ENSMUST00000118786 435 ntBASIC13.29□□□□□ -0.28
Cxcl13O55038 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl13O55038 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.29□□□□□ -0.28
Cxcl13O55038 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.29□□□□□ -0.28
Cxcl13O55038 Gm7787-201ENSMUST00000216858 688 ntBASIC13.29□□□□□ -0.28
Cxcl13O55038 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.29□□□□□ -0.28
Cxcl13O55038 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.29□□□□□ -0.28
Cxcl13O55038 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms