Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.39□□□□□ -0.11
Matn3O35701 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.39□□□□□ -0.11
Matn3O35701 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Matn3O35701 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Matn3O35701 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.39□□□□□ -0.11
Matn3O35701 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.39□□□□□ -0.11
Matn3O35701 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Matn3O35701 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.38□□□□□ -0.11
Matn3O35701 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.38□□□□□ -0.11
Matn3O35701 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Matn3O35701 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.38□□□□□ -0.11
Matn3O35701 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Gm18958-201ENSMUST00000174258 762 ntBASIC14.38□□□□□ -0.11
Matn3O35701 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Matn3O35701 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Matn3O35701 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Matn3O35701 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Matn3O35701 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.37□□□□□ -0.11
Matn3O35701 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Matn3O35701 Gm15378-201ENSMUST00000121894 207 ntBASIC14.37□□□□□ -0.11
Matn3O35701 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.37□□□□□ -0.11
Matn3O35701 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.37□□□□□ -0.11
Matn3O35701 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.37□□□□□ -0.11
Matn3O35701 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.37□□□□□ -0.11
Matn3O35701 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Matn3O35701 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.37□□□□□ -0.11
Matn3O35701 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Matn3O35701 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Matn3O35701 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Matn3O35701 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Gm36967-201ENSMUST00000193814 266 ntBASIC14.36□□□□□ -0.11
Matn3O35701 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Matn3O35701 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Matn3O35701 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.36□□□□□ -0.11
Matn3O35701 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Matn3O35701 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.36□□□□□ -0.11
Matn3O35701 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Matn3O35701 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms