Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.97■□□□□ 0.31
Nr1i3O35627 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.97■□□□□ 0.31
Nr1i3O35627 Gm29518-201ENSMUST00000190858 372 ntBASIC16.97■□□□□ 0.31
Nr1i3O35627 Gm17808-201ENSMUST00000200859 894 ntBASIC16.97■□□□□ 0.31
Nr1i3O35627 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nr1i3O35627 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Nr1i3O35627 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nr1i3O35627 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Nr1i3O35627 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Nr1i3O35627 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.96■□□□□ 0.31
Nr1i3O35627 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.96■□□□□ 0.31
Nr1i3O35627 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.96■□□□□ 0.31
Nr1i3O35627 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nr1i3O35627 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Nr1i3O35627 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nr1i3O35627 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Nr1i3O35627 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.96■□□□□ 0.3
Nr1i3O35627 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.95■□□□□ 0.3
Nr1i3O35627 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.95■□□□□ 0.3
Nr1i3O35627 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Nr1i3O35627 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Nr1i3O35627 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Nr1i3O35627 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Nr1i3O35627 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Nr1i3O35627 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.94■□□□□ 0.3
Nr1i3O35627 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.94■□□□□ 0.3
Nr1i3O35627 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.94■□□□□ 0.3
Nr1i3O35627 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.94■□□□□ 0.3
Nr1i3O35627 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Nr1i3O35627 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Nr1i3O35627 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Nr1i3O35627 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Nr1i3O35627 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nr1i3O35627 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Nr1i3O35627 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
Nr1i3O35627 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.93■□□□□ 0.3
Nr1i3O35627 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.93■□□□□ 0.3
Nr1i3O35627 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.93■□□□□ 0.3
Nr1i3O35627 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms