Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.71■□□□□ 0.11
Scamp3O35609 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Scamp3O35609 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Scamp3O35609 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scamp3O35609 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scamp3O35609 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Scamp3O35609 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.7■□□□□ 0.1
Scamp3O35609 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Scamp3O35609 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Gm6376-201ENSMUST00000209407 580 ntBASIC15.7■□□□□ 0.1
Scamp3O35609 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Scamp3O35609 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.7■□□□□ 0.1
Scamp3O35609 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Scamp3O35609 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.7■□□□□ 0.1
Scamp3O35609 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Scamp3O35609 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.69■□□□□ 0.1
Scamp3O35609 Gm4459-201ENSMUST00000118750 468 ntBASIC15.69■□□□□ 0.1
Scamp3O35609 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scamp3O35609 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.69■□□□□ 0.1
Scamp3O35609 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.69■□□□□ 0.1
Scamp3O35609 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.69■□□□□ 0.1
Scamp3O35609 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Scamp3O35609 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scamp3O35609 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Scamp3O35609 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scamp3O35609 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.69■□□□□ 0.1
Scamp3O35609 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Scamp3O35609 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.68■□□□□ 0.1
Scamp3O35609 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.68■□□□□ 0.1
Scamp3O35609 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.68■□□□□ 0.1
Scamp3O35609 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.68■□□□□ 0.1
Scamp3O35609 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.68■□□□□ 0.1
Scamp3O35609 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.68■□□□□ 0.1
Scamp3O35609 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.68■□□□□ 0.1
Scamp3O35609 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Scamp3O35609 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.68■□□□□ 0.1
Scamp3O35609 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scamp3O35609 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scamp3O35609 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scamp3O35609 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scamp3O35609 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scamp3O35609 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Scamp3O35609 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scamp3O35609 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scamp3O35609 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms