Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.74□□□□□ -0.05
Abca4O35600 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abca4O35600 Gm18766-201ENSMUST00000189811 808 ntBASIC14.74□□□□□ -0.05
Abca4O35600 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.74□□□□□ -0.05
Abca4O35600 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.74□□□□□ -0.05
Abca4O35600 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.74□□□□□ -0.05
Abca4O35600 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca4O35600 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.73□□□□□ -0.05
Abca4O35600 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.73□□□□□ -0.05
Abca4O35600 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Abca4O35600 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca4O35600 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca4O35600 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Abca4O35600 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Abca4O35600 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.73□□□□□ -0.05
Abca4O35600 Gm14042-201ENSMUST00000120139 833 ntBASIC14.73□□□□□ -0.05
Abca4O35600 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.73□□□□□ -0.05
Abca4O35600 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.73□□□□□ -0.05
Abca4O35600 Gm27533-201ENSMUST00000183800 152 ntBASIC14.73□□□□□ -0.05
Abca4O35600 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Abca4O35600 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.73□□□□□ -0.05
Abca4O35600 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Abca4O35600 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Abca4O35600 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.73□□□□□ -0.05
Abca4O35600 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca4O35600 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca4O35600 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.73□□□□□ -0.05
Abca4O35600 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abca4O35600 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Abca4O35600 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Gm7775-201ENSMUST00000218871 853 ntBASIC14.72□□□□□ -0.05
Abca4O35600 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.72□□□□□ -0.05
Abca4O35600 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.72□□□□□ -0.05
Abca4O35600 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Abca4O35600 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.72□□□□□ -0.05
Abca4O35600 Mir1982-201ENSMUST00000157368 74 ntBASIC14.72□□□□□ -0.05
Abca4O35600 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Abca4O35600 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abca4O35600 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Abca4O35600 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.71□□□□□ -0.05
Abca4O35600 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.71□□□□□ -0.05
Abca4O35600 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.71□□□□□ -0.05
Abca4O35600 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.71□□□□□ -0.05
Abca4O35600 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Abca4O35600 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Abca4O35600 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.71□□□□□ -0.05
Abca4O35600 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.71□□□□□ -0.05
Abca4O35600 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abca4O35600 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.71□□□□□ -0.06
Abca4O35600 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Abca4O35600 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Abca4O35600 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.7□□□□□ -0.06
Abca4O35600 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.7□□□□□ -0.06
Abca4O35600 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
Abca4O35600 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Abca4O35600 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Abca4O35600 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms