Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.04□□□□□ -0.16
Sh2b3O09039 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sh2b3O09039 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.04□□□□□ -0.16
Sh2b3O09039 Gm7862-201ENSMUST00000121461 292 ntBASIC14.04□□□□□ -0.16
Sh2b3O09039 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.04□□□□□ -0.16
Sh2b3O09039 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.04□□□□□ -0.16
Sh2b3O09039 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.04□□□□□ -0.16
Sh2b3O09039 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sh2b3O09039 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.04□□□□□ -0.16
Sh2b3O09039 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sh2b3O09039 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Sh2b3O09039 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sh2b3O09039 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sh2b3O09039 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.03□□□□□ -0.16
Sh2b3O09039 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.03□□□□□ -0.16
Sh2b3O09039 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.03□□□□□ -0.16
Sh2b3O09039 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.03□□□□□ -0.16
Sh2b3O09039 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sh2b3O09039 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sh2b3O09039 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sh2b3O09039 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2b3O09039 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.02□□□□□ -0.16
Sh2b3O09039 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2b3O09039 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2b3O09039 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2b3O09039 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2b3O09039 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sh2b3O09039 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Sh2b3O09039 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sh2b3O09039 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.02□□□□□ -0.17
Sh2b3O09039 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.02□□□□□ -0.17
Sh2b3O09039 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Sh2b3O09039 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.02□□□□□ -0.17
Sh2b3O09039 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.02□□□□□ -0.17
Sh2b3O09039 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sh2b3O09039 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sh2b3O09039 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sh2b3O09039 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.01□□□□□ -0.17
Sh2b3O09039 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.01□□□□□ -0.17
Sh2b3O09039 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sh2b3O09039 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sh2b3O09039 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Sh2b3O09039 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sh2b3O09039 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms