Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Pkd1O08852 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.88□□□□□ -0.83
Pkd1O08852 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC9.88□□□□□ -0.83
Pkd1O08852 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC9.88□□□□□ -0.83
Pkd1O08852 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Pkd1O08852 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Pkd1O08852 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC9.87□□□□□ -0.83
Pkd1O08852 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC9.87□□□□□ -0.83
Pkd1O08852 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.87□□□□□ -0.83
Pkd1O08852 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC9.87□□□□□ -0.83
Pkd1O08852 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.87□□□□□ -0.83
Pkd1O08852 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Gm16026-204ENSMUST00000162652 683 ntBASIC9.87□□□□□ -0.83
Pkd1O08852 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC9.87□□□□□ -0.83
Pkd1O08852 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Pkd1O08852 Gm14042-201ENSMUST00000120139 833 ntBASIC9.87□□□□□ -0.83
Pkd1O08852 Gm8602-201ENSMUST00000184045 607 ntBASIC9.87□□□□□ -0.83
Pkd1O08852 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC9.87□□□□□ -0.83
Pkd1O08852 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Pkd1O08852 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Haglr-201ENSMUST00000100000 2085 ntBASIC9.86□□□□□ -0.83
Pkd1O08852 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Pkd1O08852 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Pkd1O08852 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Gm16215-201ENSMUST00000161990 637 ntBASIC9.86□□□□□ -0.83
Pkd1O08852 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Pkd1O08852 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC9.86□□□□□ -0.83
Pkd1O08852 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.86□□□□□ -0.83
Pkd1O08852 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC9.86□□□□□ -0.83
Pkd1O08852 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.86□□□□□ -0.83
Pkd1O08852 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Pkd1O08852 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Pkd1O08852 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC9.85□□□□□ -0.83
Pkd1O08852 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.85□□□□□ -0.83
Pkd1O08852 Gm38225-201ENSMUST00000194001 393 ntBASIC9.85□□□□□ -0.83
Pkd1O08852 Gm6745-201ENSMUST00000199216 526 ntBASIC9.85□□□□□ -0.83
Pkd1O08852 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Pkd1O08852 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Gm8318-201ENSMUST00000182954 872 ntBASIC9.85□□□□□ -0.83
Pkd1O08852 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Gm8096-201ENSMUST00000209921 1591 ntBASIC9.85□□□□□ -0.83
Pkd1O08852 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC9.85□□□□□ -0.83
Pkd1O08852 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.85□□□□□ -0.83
Pkd1O08852 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Gm10499-201ENSMUST00000174094 934 ntBASIC9.85□□□□□ -0.83
Pkd1O08852 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Pkd1O08852 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms