Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trove2O08848 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trove2O08848 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trove2O08848 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Trove2O08848 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trove2O08848 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trove2O08848 Gm16061-201ENSMUST00000122167 857 ntBASIC16.23■□□□□ 0.19
Trove2O08848 Gm13474-201ENSMUST00000122466 815 ntBASIC16.23■□□□□ 0.19
Trove2O08848 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.23■□□□□ 0.19
Trove2O08848 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trove2O08848 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.22■□□□□ 0.19
Trove2O08848 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Gm10252-201ENSMUST00000209541 832 ntBASIC16.22■□□□□ 0.19
Trove2O08848 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trove2O08848 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trove2O08848 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.21■□□□□ 0.19
Trove2O08848 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.21■□□□□ 0.19
Trove2O08848 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.21■□□□□ 0.19
Trove2O08848 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.21■□□□□ 0.19
Trove2O08848 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.21■□□□□ 0.19
Trove2O08848 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Gm13559-201ENSMUST00000120476 863 ntBASIC16.21■□□□□ 0.19
Trove2O08848 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Mir6982-201ENSMUST00000184354 68 ntBASIC16.21■□□□□ 0.19
Trove2O08848 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.21■□□□□ 0.19
Trove2O08848 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Trove2O08848 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.21■□□□□ 0.19
Trove2O08848 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trove2O08848 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trove2O08848 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.21■□□□□ 0.18
Trove2O08848 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trove2O08848 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trove2O08848 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.2■□□□□ 0.18
Trove2O08848 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trove2O08848 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trove2O08848 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trove2O08848 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Gm7370-201ENSMUST00000219471 767 ntBASIC16.2■□□□□ 0.18
Trove2O08848 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trove2O08848 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trove2O08848 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
Trove2O08848 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms